Via’s are not quite the same as THT but, THT’s can be used as Via’s.
Sure, you may need to consider what/how you want to handle the difference’s in specifying their usage (to a Vendor) but, basically you can get what you want…
Example shows a stock Kicad Via and my HomeMade Via (a THT) - both placed on a THT-Pad and shows the result of Kicad exported STEP then, loaded the STEP into FreeCAD.
You see the Kicad Via has Nothing (only the Pad is shown, whereas homemade Via has both Via and THT holes…